Boisvert, Sebastien
2014-08-28 04:36:11 UTC
To compile Ray, you need a C++ compiler, an MPI library, and optionally
zlib.
Usually, people are using g++ and Open-MPI or g++ and MPICH.
The compiler wrapper is usually called mpicxx, which is available on most super computers already.
It is a bit different on a Cray or on a Blue Gene though.
________________________________________
From: ***@nmu.edu [***@nmu.edu]
Sent: Wednesday, August 27, 2014 10:27 PM
To: Boisvert, Sebastien
Subject: Compiling Ray
Dear Dr. Boisvert,
I would like to use Ray to produce a genome assembly of an avian genome we
had sequenced, but am very new to working with such programs.
Specifically, I am having trouble compiling Ray and was wondering if there
was any good documentation or tutorial on the code needed to compile Ray.
Ideally, we would be running the assembly on a small cluster.
Thanks,
Zach Gayk
zlib.
Usually, people are using g++ and Open-MPI or g++ and MPICH.
The compiler wrapper is usually called mpicxx, which is available on most super computers already.
It is a bit different on a Cray or on a Blue Gene though.
________________________________________
From: ***@nmu.edu [***@nmu.edu]
Sent: Wednesday, August 27, 2014 10:27 PM
To: Boisvert, Sebastien
Subject: Compiling Ray
Dear Dr. Boisvert,
I would like to use Ray to produce a genome assembly of an avian genome we
had sequenced, but am very new to working with such programs.
Specifically, I am having trouble compiling Ray and was wondering if there
was any good documentation or tutorial on the code needed to compile Ray.
Ideally, we would be running the assembly on a small cluster.
Thanks,
Zach Gayk